Naval Base San Diego
Naval Base San Diego is one of the largest U.S. Navy installations on the West Coast, home to a wide variety of fleet units and support facilities. Our lodging options are within easy reach of base gates and local services—ideal for PCS or TDY stays.
Per Diem Lodging helps military personnel, government travelers, and dependents find affordable per diem lodging near Naval Base San Diego. Whether you’re on PCS, TDY, training at the Mariner Skills Training Center Pacific (MSTCPAC), general orders, or deployment, our partner hotels honor government per diem rates and offer traveler-friendly amenities.
Why Choose Per Diem Lodging for Your San Diego Stay
We specialize in per diem compliant rates that meet GSA guidelines, so service members and government travelers get cost-effective lodging without compromising comfort.
- Government rate rooms near base
- Flexible booking for PCS & TDY
- Free breakfast, parking & extra amenities (varies by location)
- Dedicated, knowledgeable travel support team
- Specializing in supporting BDOC and OOD Phase 1 trainees – we make sure you get your CNA and that you stay at exactly the right hotel; we also assist with getting your Travel Advance
Hotels & Rooms Near Naval Base San Diego- Featured Properties
Homewood Suites by Hilton – Hotel Circle

- Extended-stay suites, with kitchenette perfect for PCS stays
- Free Daily Breakfast and Light Dinner with beer, wine and soda’s Monday through Wednesday
- Great Location with easy freeway access
- Free parking and automatic room upgrade to a 1 bedroom suite only when booking through Per Diem Lodging
Homewood Suites by Hilton – Bayside/Downtown

- Extended-stay suites, with kitchenette perfect for PCS stays
- Free Daily Breakfast and Light Dinner with beer, wine and soda’s Monday through Wednesday
- Great downtown location within walking distance of Little Italy
- Steeply discounted parking and automatic room upgrade, when available, exclusively when booking through Per Diem Lodging
Carte Hotel by Hilton – Downtown Bayside
- Comfortable rooms close to base and city attractions
Hacienda Hotel Old Town
- Best per diem value with breakfast included.
Booking with us is easy:
- Call our travel team at (714) 325-8813 or email at Ed.Sanborn@PerDiemLodging.com
- Tell us your travel dates and per diem requirements
- We secure the best rate within government guidelines
Frequently Asked Questions
Do your hotels honor government per diem rates?
Yes. All of our partner hotels honor official government per diem rates and comply with GSA guidelines for PCS and TDY travel in San Diego and all popular US Navy Destinations.
Can you help me obtain a Certificate of Non-Availability (CNA)?
Yes. We regularly assist service members and trainees with how to obtain a CNA when required, including for BDOC and OOD Phase 1 training assignments.
Do you support long-term PCS lodging?
Absolutely. We specialize in extended-stay lodging for PCS travelers, including suite-style hotels with kitchens, laundry facilities, and flexible booking options. We also offer furnished apartments and condos for stays over 30 days.
How close are your hotels to Naval Base San Diego?
Our featured hotels are located near major base gates and provide convenient access to Naval Base San Diego, Hotel Circle, Downtown Bayside, and Old Town.
Is there a cost to use Per Diem Lodging?
No, we are partners with our hotels and when you book with us it is like booking directly with the hotel. Our booking assistance is completely free for military members, government travelers, and authorized dependents.
